sbml Directory Reference

Directory dependency graph for sbml:

Directories
directory	annotation
directory	common
directory	conversion
directory	extension
directory	math
directory	packages
directory	util
directory	validator
directory	xml

Files
file	AlgebraicRule.cpp
	Implementations of AlgebraicRule.
file	AlgebraicRule.h
	Definitions of AlgebraicRule.
file	AssignmentRule.cpp
	Implementations of AssignmentRule.
file	AssignmentRule.h
	Definitions of AssignmentRule.
file	Compartment.cpp
	Implementations of Compartment and ListOfCompartments.
file	Compartment.h
	Definitions of Compartment and ListOfCompartments.
file	CompartmentType.cpp
	Implementation of CompartmentType and ListOfCompartmentTypes.
file	CompartmentType.h
	Definitions of CompartmentType and ListOfCompartmentTypes.
file	Constraint.cpp
	Implementations of Constraint and ListOfConstraints.
file	Constraint.h
	Definitions of Constraint and ListOfConstraints.
file	Delay.cpp
	Implementation of Delay.
file	Delay.h
	Definition of Delay.
file	Event.cpp
	Implementations of Event and ListOfEvents.
file	Event.h
	Definitions of Event and ListOfEvents.
file	EventAssignment.cpp
	Implementation of EventAssignment.
file	EventAssignment.h
	Definition of EventAssignment and ListOfEventAssignments.
file	ExpectedAttributes.cpp
	Implementation of ExpectedAttributes, the class allowing the specification of attributes to expect.
file	ExpectedAttributes.h
	Definition of ExpectedAttributes, the class allowing the specification of attributes to expect.
file	FunctionDefinition.cpp
	Implementation of FunctionDefinition and ListOfFunctionDefinitions.
file	FunctionDefinition.h
	Definitions of FunctionDefinition and ListOfFunctionDefinitions.
file	InitialAssignment.cpp
	Implementation of InitialAssignment and ListOfInitialAssignments.
file	InitialAssignment.h
	Definitions of InitialAssignment and ListOfInitialAssignments.
file	KineticLaw.cpp
	Implementation of KineticLaw.
file	KineticLaw.h
	Definition of KineticLaw.
file	ListOf.cpp
	Wraps List and inherits from SBase.
file	ListOf.h
file	LocalParameter.cpp
	Implementations of LocalLocalParameter and ListOfLocalLocalParameters.
file	LocalParameter.h
	Definitions of LocalParameter and ListOfLocalParameters.
file	Model.cpp
	Implementation of Model.
file	Model.h
	Definition of Model.
file	ModifierSpeciesReference.cpp
	Implementation of ModifierSpeciesReference.
file	ModifierSpeciesReference.h
	Definitions of ModifierSpeciesReference.
file	Parameter.cpp
	Implementations of Parameter and ListOfParameters.
file	Parameter.h
	Definitions of Parameter and ListOfParameters.
file	Priority.cpp
	Implementation of Priority.
file	Priority.h
	Definition of Priority.
file	RateRule.cpp
	Implementations of RateRule.
file	RateRule.h
	Definitions of RateRule.
file	Reaction.cpp
	Implementations of Reaction and ListOfReactions.
file	Reaction.h
	Definitions of Reaction and ListOfReactions.
file	Rule.cpp
	Implementations of Rule and ListOfRules.
file	Rule.h
	Definitions of Rule and ListOfRules.
file	SBase.cpp
	Implementation of SBase, the base object of all SBML objects.
file	SBase.h
	Definition of SBase, the base object of all SBML objects.
file	SBMLConstructorException.cpp
	Implementation of SBMLConstructorException, the exception class for constructor exceptions.
file	SBMLConstructorException.h
	Definition of SBMLConstructorException, the exception class for constructor exceptions.
file	SBMLConvert.cpp
	Performs conversion between SBML levels.
file	SBMLDocument.cpp
	Implementation of the top-level container for an SBML Model and associated data.
file	SBMLDocument.h
	Top-level container for an SBML Model and associated data.
file	SBMLError.cpp
	Represents SBML errors and other diagnostics.
file	SBMLError.h
	Represents SBML errors and other diagnostics.
file	SBMLErrorLog.cpp
	Stores errors (and messages) encountered while processing SBML.
file	SBMLErrorLog.h
	Stores errors (and messages) encountered while processing SBML.
file	SBMLErrorTable.h
	Represents SBML errors and other diagnostics.
file	SBMLNamespaces.cpp
	SBMLNamespaces class to store level/version and namespace.
file	SBMLNamespaces.h
	SBMLNamespaces class to store level/version and namespace.
file	SBMLReader.cpp
	Reads an SBML Document into memory.
file	SBMLReader.h
	Reads an SBML Document into memory.
file	SBMLTransforms.cpp
	Transform functions.
file	SBMLTransforms.h
file	SBMLTypeCodes.cpp
	Enumeration to identify SBML objects at runtime.
file	SBMLTypeCodes.h
	Enumeration to identify SBML objects at runtime.
file	SBMLTypes.h
	Include all SBML types in a single header file.
file	SBMLVisitor.cpp
	Visitor Design Pattern for the SBML object tree.
file	SBMLVisitor.h
	Visitor Design Pattern for the SBML object tree.
file	SBMLWriter.cpp
	Writes an SBML Document to file or in-memory string.
file	SBMLWriter.h
	Writes an SBML Document to file or in-memory string.
file	SBO.cpp
	SBO utility functions.
file	SBO.h
	SBO utility Function.
file	SimpleSpeciesReference.cpp
	Implementation of SimpleSpeciesReference.
file	SimpleSpeciesReference.h
	Definitions of SimpleSpeciesReference.
file	Species.cpp
	Implementations of Species and ListOfSpecies.
file	Species.h
	Definitions of Species and ListOfSpecies.
file	SpeciesReference.cpp
	Implementation of SpeciesReference and ListOfSpeciesReferences.
file	SpeciesReference.h
	Definitions of SpeciesReference and ListOfSpeciesReferences.
file	SpeciesType.cpp
	Implementation of SpeciesType and ListOfSpeciesTypes.
file	SpeciesType.h
	Definitions of SpeciesType and ListOfSpeciesType.
file	StoichiometryMath.cpp
	Implementation of StoichiometryMath.
file	StoichiometryMath.h
	Definition of StoichiometryMath.
file	SyntaxChecker.cpp
	Syntax checking functions.
file	SyntaxChecker.h
	Syntax checking functions.
file	Trigger.cpp
	Implementation of Trigger.
file	Trigger.h
	Definition of Trigger.
file	Unit.cpp
	Implementations of Unit and ListOfUnits.
file	Unit.h
	Definitions of Unit and ListOfUnits.
file	UnitDefinition.cpp
	Implementations of SBML's UnitDefinition and ListOfUnitDefinitions.
file	UnitDefinition.h
	Definitions of UnitDefinition and ListOfUnitDefinitions.
file	UnitKind.c
	SBML UnitKind enumeration.
file	UnitKind.h
	Definition of SBML's UnitKind enumeration.