align_pairwise.hpp File Reference

Provides pairwise alignment function. More...

#include <functional>
#include <iostream>
#include <tuple>
#include <type_traits>
#include <meta/meta.hpp>
#include <seqan3/alignment/configuration/all.hpp>
#include <seqan3/alignment/pairwise/alignment_result.hpp>
#include <seqan3/alignment/pairwise/alignment_configurator.hpp>
#include <seqan3/alignment/pairwise/detail/concept.hpp>
#include <seqan3/alignment/pairwise/detail/type_traits.hpp>
#include <seqan3/alignment/pairwise/execution/all.hpp>
#include <seqan3/core/algorithm/all.hpp>
#include <seqan3/core/parallel/execution.hpp>
#include <seqan3/core/simd/simd_traits.hpp>
#include <seqan3/core/simd/simd.hpp>
#include <seqan3/core/type_traits/basic.hpp>
#include <seqan3/range/views/persist.hpp>
#include <seqan3/std/concepts>
#include <seqan3/std/ranges>

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Namespaces
	seqan3
	The main SeqAn3 namespace.

Functions
template<typename sequence_t , typename alignment_config_t >
constexpr auto	seqan3::align_pairwise (sequence_t &&seq, alignment_config_t const &config)
	Computes the pairwise alignment for a pair of sequences or a range over sequence pairs. More...

Detailed Description

Provides pairwise alignment function.

Author

Rene Rahn <rene.rahn AT fu-berlin.de>