A special sub namespace for the alignment configurations. More...

Classes
struct	aligned_ends
	The configuration for aligned sequence ends. More...

struct	band
	Configuration element for setting the band. More...

struct	gap
	A configuration element for the gap scheme. More...

struct	max_error
	Sets the maximal errors allowed during an edit distance computation. More...

struct	mode
	Sets the alignment mode. More...

class	result
	Sets the result of the alignment computation. More...

struct	scoring
	Sets the scoring scheme for the alignment algorithm. More...

Typedefs
using	parallel = seqan3::detail::parallel_mode< std::integral_constant< detail::align_config_id, detail::align_config_id::parallel > >
	Enables the parallel execution of the alignment algorithm if possible for the given configuration. More...

Variables
constexpr configuration	edit
	Shortcut for edit distance configuration. More...

constexpr detail::vectorise_tag	vectorise {}
	Enables the vectorised alignment computation if possible for the current configuration. More...

Detailed Description

A special sub namespace for the alignment configurations.

Classes