 |
SeqAn3 3.3.0
The Modern C++ library for sequence analysis.
|
|
SeqAn3 3.3.0
The Modern C++ library for sequence analysis.
|
| OP | Description |
|---|---|
| M | Alignment match (can be a sequence match or mismatch, used only in basic CIGAR representations) |
| I | Insertion to the reference |
| D | Deletion from the reference |
| N | Skipped region from the reference |
| S | Soft clipping (clipped sequences present in seqan3::sam_record::sequence) |
| H | Hard clipping (clipped sequences NOT present in seqan3::sam_record::sequence) |
| P | Padding (silent deletion from padded reference) |
| = | Sequence match |
| X | Sequence mismatch |
1.9.8